rs37402049 SNP Detail

Summary

• ID
  rs37402049
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130808474 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCCCTTTA TCTGTTTATT
  TGCTTAAGGT ACGTGAGTTC AGGGTTCCCA CCAGCACAGT TCCCTGGGCG ACCAAGTGAT
  TTGTAACTAG CATTGTCATA GTCTGTATAG ATTCCTCTCC GGGGAGAATC CAGTGACCTT
  TTGTTCACTG GTCAGGATCA AGAAATTTCT GTCTTCCTCT CATGGTAAAA TGTTTTATGG
  S
  TTTGGGAGAT TGGGCAAGGT CTGTTTCTTG TCCCCTGTTT GTCCCTAAAC CAAGTCCTTT
  TTTCCTTCAG GAAGCTGAGG TGGGATACTG GGTGGAGCAG GCAGAGACGA CTGGGAAATA
  GTTCTGATAA CAAAAGGACT AAGGGGCTGG AGAGATGGCT CAGTGGTTAA GAGCACTCAG
  TTCTCTCCCA CTGGTTCAAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51635738	NES14653357	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37402049					SNP	G	G	G	G	G	G	C	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51635738	NES14653357	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130808474 () rs orientation: forward

Symbol	Name	Function Class
Rr585250	regulatory region 585250	73 bp distal