rs37390648 SNP Detail

Summary

• ID
  rs37390648
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:107028957 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGAATCTG ATGTGTCACT
  CTATGTGACT CAGAGGGCAG TGGCCACATG CCATCTTGAT GGAGAACCTG CTATTTTAAA
  ACTGACCTAC ACTGGGAACT TGTGAACAGG GAACAATCTA ATCACATTTT AGGGAGTTGG
  ATTTAACCTT CCACAGCTCC ATAGTGAGAG AAAGACATGT AGGCAGTTGT GCAGAACTGG
  M
  AGGTCACAGA TGCTAATAAA ACAGACATCT CAGGTGACAG GAAGTTCAGC AAAGACACTG
  AAGGGCACAA AAGGCAGCCT CACTTTTGGT GACCTGGAAC AGAGTTTATC AACTGACAGT
  AACTCTGGTA TTTGAGAGCC TTAAGCCTGA GGTCAGTAGG TGAATGTACC ACTCCAGTCA
  CTTGCCTGCT CAAGTTTTAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
ss51400751	NES13726859	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	DBA/2J	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
rs37390648					SNP	A	A	A	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51400751	NES13726859	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:107028957 () rs orientation: forward

Symbol	Name	Function Class
Rr379902	regulatory region 379902	within coordinates
Rr635986	regulatory region 635986	83 bp proximal