ACCTAATTTG AAGCCAAATA AGAAAGACAG ATGGGTGGTT ACTGGGGTCA GTAATGTAGC AAATTACCTT CTTCTGTCTC ATGGGATTCA TCTCTTGACA CTTTAAACTT TTAGAAAGGT AACTGTTAAC TTTAAATTTC AAAAAGAAAA TTGCTCGAAT TTAACTTTTA TGAGGAAATA AAACTGATTA GAAAAAGATT K CATGCTAGGC ATATCAGACA GCTTGTATAA CAATATTAAA AATATACATT TCCTCTAGGC ATCCAAAAGA GCCTACTGAG AAGCCAGGCC AGGAAGGTGG TAGCATTTGG ATAAGATGCT GCTGAAATAT GGAGGCAGAG GAGACATCCT CGTGTTAGGC TCCAAGTCTC TTCCTTCTTA ACAGCCCGTC TGAAACACTC K = G/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
AKR/J |
BALB/cByJ |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
NOD/ShiLtJ |
NZW/LacJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss51649292 | NES14653887 | PERLEGEN | MM_PANEL2 | f | SNP | T | T | T | T | G | T | T | T | T | G |
SNP Consensus Information | |||||||||||||||
SNP | Consensus Type | A/J |
AKR/J |
BALB/cByJ |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
NOD/ShiLtJ |
NZW/LacJ |
WSB/EiJ |
||||
rs37388190 | SNP | T | T | T | T | G | T | T | T | T | G |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51649292 | NES14653887 | PERLEGEN | MM_PANEL | f | SNP | G/T |
Location: Chr3:135366563 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Nfkb1 | nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105 | Intron | ||||||
Rr585759 | regulatory region 585759 | 1397 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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