rs37386140 SNP Detail

Summary

• ID
  rs37386140
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:86845337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCAGCCTTA CCCCGCTGAT
  TGTATTTTCC TTTGCCTCTC TGCCCTTCCC TTCCTCTCCT GCTACCTGCC CTTACATCAT
  ACATTTGATG TAAGGCAGTG TTCCAGGCAC TTTTACAGTG TTGTTTTAGT TATTTCTCCC
  TCCCTCTCTC TTTCTTGAGC AGTGGAGCTT GAACCAAGGC TTGTCCACTC CAATGCGTGG
  Y
  CTCCCATGGA GCAATCTCCC CAGCTGCTGC TCCACTCTGA GTAACAGCCA TCACCCAGGC
  TTCTGTGCTT GATATGCTTG TCTCACCAGT GGAGTTTCAA CTGGTGTTTG GTATTTGGGG
  TTGGAAGGCT TAAAACAAAG TGAATGAGTT TCAAATGCAG TCTTTGGTTG AGCTGAGCCC
  AGTGGTACTA GCACTTGGCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss51748783	NES14798623	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs37386140					SNP	T	T	T	T	T	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51748783	NES14798623	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86845337 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Aak1	AP2 associated kinase 1			Intron
				Noncoding-Transcript-Variant
Rr633547	regulatory region 633547			1956 bp proximal