rs37365021 SNP Detail

Summary

• ID
  rs37365021
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127504807 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCACA CACCCGCCTA CTCTCTTCCG
  Y
  TGAGAACAAG GAATTTCCAG CCTTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss50947333	NES14150902	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs37365021					SNP	T	T	T	T	T	T	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50947333	NES14150902	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127504807 () rs orientation: forward

Symbol	Name	Function Class
1700012D01Rik	RIKEN cDNA 1700012D01 gene	87 bp downstream
Rr369095	regulatory region 369095	within coordinates
Rr440992	regulatory region 440992	1784 bp distal
Rr440993	regulatory region 440993	1343 bp proximal
Rr440994	regulatory region 440994	1485 bp proximal
Tssr96239	transcription start site region 96239	1796 bp downstream
Tssr96240	transcription start site region 96240	1764 bp downstream
Tssr96241	transcription start site region 96241	529 bp downstream
Tssr99817	transcription start site region 99817	1328 bp upstream
Tssr99818	transcription start site region 99818	1273 bp upstream
Tssr99819	transcription start site region 99819	349 bp upstream
Tssr99820	transcription start site region 99820	55 bp upstream