rs37332680 SNP Detail

Summary

• ID
  rs37332680
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147160817 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGGATGGTA ACTGTTGCTT
  CATGGTGTCA CTGGCGCTTC CAGTCATCTG TGTGAAGCCC AGCTTCATTA GCTTCCTCCT
  ACGGGTAACT ACTCTCTCAG AAACAGCAAT TCTAGTTTTA CAAGAGAAAA AAAAAAAGAT
  GTTTACATGG TAAATGAAAA AACTCCATTG TTTGAAAATA GCTCCAGTGT CATGGTGAGA
  W
  TTCAGGACAG ACCTAGATCC AGGGGCGGCA GGTACTCTAA CATACTTGGT AAAGTGCTTA
  GGACTGGAAT GTTGATATCC TTTAAGTATT ACTAAATGTC ATATCATGTG TTAGGCAAAA
  AGAATAGAGT TGTAGCGCTG CAGCTCTAAA TGAAATTGCT TCTGTTTGTA TAGAATCTGC
  AGTGTGGATG CCTACACACT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51046998	NES13892174	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	A	T	T	T	A	T	T	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37332680					SNP	T	T	T	T	T	A	T	T	T	A	T	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51046998	NES13892174	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147160817 () rs orientation: forward

Symbol	Name	Function Class
Rr587152	regulatory region 587152	149 bp proximal