rs37331150 SNP Detail

Summary

• ID
  rs37331150
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr7:96982683 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATTT CTGTGCAAGC AAGGAAATGC
  Y
  TCAGGTTGGG TGGTCTCTTC TTCCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ
ss51918043	NES14941045	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	AKR/J	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ
rs37331150					SNP	C	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51918043	NES14941045	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:96982683 () rs orientation: forward

Symbol	Name	Function Class
Kctd21	potassium channel tetramerisation domain containing 21	Intron
Rr400445	regulatory region 400445	1084 bp downstream
Rr651402	regulatory region 651402	1467 bp distal
Rr651403	regulatory region 651403	1139 bp distal
Rr651404	regulatory region 651404	1143 bp distal
Rr651405	regulatory region 651405	within coordinates
Tssr67964	transcription start site region 67964	1145 bp downstream
Tssr67965	transcription start site region 67965	825 bp downstream
Tssr73573	transcription start site region 73573	1381 bp upstream
Tssr73574	transcription start site region 73574	1362 bp upstream
Tssr73575	transcription start site region 73575	1334 bp upstream
Usp35	ubiquitin specific peptidase 35	1456 bp upstream