rs37322525 SNP Detail

Summary

• ID
  rs37322525
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:18820114 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAGATACA TTGTTCATGT
  AGCATAAAAA ATTGACTGGA CCAAAGTTGA TTGACTGTTT GGAGTGAAAT TATCAGTTTT
  GATCGATTAG TGTGCTTGTA GCAATGACTG AATTAATCCA TCAGTTCAAC TAAGTAGGTT
  AATAGAAATG CTGTAATAAC AAAAATATAA GCTGTGAGGA AGCACTTTCA CTTTCATTGT
  Y
  GATTAAATGA AACTCAGTAA CGAAAACTCA ATGTTTTCAT CACTTGGAAT TATATATGCT
  CAAGTGACTC ATTTATTACT TACAATGCTA AAATACTAAT ATAAAAATTA ATAATAATGC
  AGTGACTATC ACGCGCAGGA TAGGGGAAAT GAATGACAGG GAGCTGAGAA GTAAGAGTAC
  ATTTTAATTT TAACTTCAGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51245867	NES13801913	PERLEGEN	MM_PANEL2	f	SNP	C		T	T	T	T	T	T	T	T	C	T	T	T	T
ss133041779	ENSMUSSNP1654267	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37322525					SNP	C	C	T	T	T	T	T	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51245867	NES13801913	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:18820114 () rs orientation: forward

Symbol	Name	Function Class
Rr626951	regulatory region 626951	435 bp distal
Rr626952	regulatory region 626952	542 bp distal