rs37321283 SNP Detail

Summary

• ID
  rs37321283
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:8104763 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGCTAAAA GAAGCTTTGT
  TCTGTAAGTT GCTTTTTGTC AGGATATTTT ATTACTGAAA CAGAAATAAA ACCAAAACAC
  CATAATGTAA CCACATATTT CCCATCATTG CAAATTAGCT ACCTAAACAA AACTCTCATT
  AATAGCCTAG TGGGAAAATA AAGTGTCCCA ATTGTTACCC AGAATGCAGC CTTTTATACT
  Y
  GGTCCTAAAG CATCACTGAA GATAAATGTA ATTTCCGTGA TAAGTCAGGA GCCTTTAAAT
  ATTGGGTTTT TATATTCCAG AGTTTATCAT AACATGCTTC ATATGTGTGG TGATTTGCCT
  ACATGTATGT CTGTATACCA CCACATTCAT GCCCGATGCC ATTAAAGGCC AGAAGAGGGC
  ATCAAGCACC CCAGAACTGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	C3H/HeJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51554643	NES14866342	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	C	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	C3H/HeJ	CAST/EiJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37321283					SNP	T	C	C	C	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51554643	NES14866342	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:8104763 () rs orientation: forward

Symbol	Name	Function Class
Col28a1	collagen, type XXVIII, alpha 1	Intron
D6Mit348	DNA segment, Chr 6, Massachusetts Institute of Technology 348	344 bp proximal
Rr626348	regulatory region 626348	165 bp proximal
Rr626349	regulatory region 626349	1043 bp proximal