rs37318864 SNP Detail

Summary

• ID
  rs37318864
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:30754893 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTCAGGAA AAAATGGAAA
  GAAAAATAAA AGGAGGAAAT CAATGAAAAA AAGACTAAAC TAGTCAAGAG CTAGGGATAG
  CGGAAGGAGG CACATGAAGA GTTAAGGACT AGCTTCTGCG TGCTTCTTAG CACACAGTCT
  TTTGAGCAGG AAGTTACTAC ACTCACTCTG AGAAAACATT TTACTCATTT TTCTTCAAAA
  S
  TGTGTCTGCA AAAACTGAAT TAGGCTGTGT TCTCCCTTTC GGCTTCACAA TGCTGACTCG
  GCACTAACTT TTCGAGTCTA AGGTGTTTTT AGTAGGTTAA GGTTGTTTTC TATGATATCC
  GAAGAAGAGT TAATAGTTGA TCTACTTCTC TTGTATAAGC TGTTTTTATT TGATTCCTCT
  TGGATCGGTA AGGAGTAATT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51448684	NES14440128	PERLEGEN	MM_PANEL2	f	SNP	C	C	G	C	C	C	G	C	C	C	G	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37318864					SNP	C	C	G	C	C	C	G	C	C	C	G	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51448684	NES14440128	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:30754893 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13042	CpG island 13042	619 bp proximal
Lrrc31	leucine rich repeat containing 31	901 bp upstream
Rr574816	regulatory region 574816	656 bp distal
Tssr32902	transcription start site region 32902	941 bp upstream
Tssr32903	transcription start site region 32903	872 bp upstream