rs37316069 SNP Detail

Summary

• ID
  rs37316069
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:21992566 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCAGTCAA GGCAGAACTG
  CCTTGCATTC CCCTAACATT CGCTTCCAAA AGGTTTTTTT CCAACCCATG AGTCACTTCC
  AAGTCAGAAT CAGAGACAAA CGCCTGTAAC TGTGTGCCAG TGAGTCAGAT TTCCACCCTG
  CCTTATGGAC GCTCTTCTAG CTCCAAGAAG ACAGGGCAGT CCGCAGCCAC CCGGCACAGC
  R
  TGAAAGGTGT TACAACTGCT GCTTGTTGGA ACCAGCTCCC AAGCCCACCT CTCTGGCATC
  CAGCATCACA TTTCAACCCA TCAAAAGCTG GTTTTTTTTC TTCCCAGTGT ATCCTCAATC
  AGGAACTGCG GGTGCTATCT ATCATGCTCA GAACGTGCCC CCACCCAGCC CAGGGAAATA
  AAGGTGAATT CAAAAGGAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51434354	NES14437054	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37316069					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51434354	NES14437054	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:21992566 () rs orientation: forward

Symbol	Name	Function Class
Gm31813	predicted gene, 31813	within coordinates
Gm64857	predicted gene, 64857	1289 bp downstream
Rr367415	regulatory region 367415	776 bp downstream
Rr574167	regulatory region 574167	993 bp distal
Rr574168	regulatory region 574168	within coordinates