rs37311804 SNP Detail

Summary

• ID
  rs37311804
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:49794793 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTCTAGGA TCCATGCCTT
  GCCACTTAGA ACCACCTGTA AATGAAAGTC TGTCTGGTCA GCTTCAGCGG TGCACTTCAA
  TAACAGGATG CGTGGGCAAA GCGTAAAGCA CATCTGGATT ATCCATCGGT TTCCTGCAAC
  TGCCACCTTC TTTTCTCTCT TGGTCTTCAG CCCTGTGATT TCAGTATCTT TGGGTTATGA
  Y
  AGGGCTGTGA ATAGCTTCAA AATCTCTTTG CCATTTGTAC TCCAGATGTC ATGAAGCATC
  TGTTCACCCT TGAATTTATT TTTTCTTCTG ACTGACTTAC AAAATCCTTT ATGTACTGAG
  GCTAGTTGGG CTGCTTTGTC TTCTTTATTG CGAATTCTCT TTACTGAATT TCATTTGTTT
  TCTAGTCTTG ATTACGGTAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51521398	NES14699176	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37311804					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51521398	NES14699176	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:49794793 () rs orientation: forward

Symbol	Name	Function Class
Rr576113	regulatory region 576113	497 bp proximal
Rr576114	regulatory region 576114	1848 bp proximal