rs37296246 SNP Detail

Summary

• ID
  rs37296246
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:107984842 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAATCCAC AGGTGTTGGA
  ATACTATGCT CAGTCATCTT GATGATGCTC ACACTCATCA GAGACATTGT CCTAGTAGGA
  CCTTGACTGT TTTCCACTAT GAATGAAAGT GTGTAACTAC CTGAAAACTG CATGCAATGA
  CATTTCAGCC CTCTGTCCTT AGAGACCTCA GTCCAACCAT GTCAAGTCTT ATGCACCATC
  Y
  GTTTCTACCC ACGCAAGAAA GAGCTCAAGC TGGGTAAACT GCCACTATAA CACTGTGTGA
  CTTGGGGCTT TTCATTTTGT TACATTTTTG GTTTTTATTT AAGACACAAC ATCAATTTTA
  TTGCTGGTCT TGAACTTGAT GCAATCCTTG AGCCTCAGCC TCTGAGTACT GGGCATTCTC
  TCTTATAAGG CATCTTTTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51822452	NES14765350	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37296246					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51822452	NES14765350	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:107984842 () rs orientation: forward

Symbol	Name	Function Class
Rr636023	regulatory region 636023	547 bp proximal
Rr636024	regulatory region 636024	632 bp proximal