rs37283989 SNP Detail

Summary

• ID
  rs37283989
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:145569919 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATTGGTAA TTCTGTTCTC
  TAAAGCCAGA GAGATGGAAA AGTAGTGTTC TTTTGTATTA TAGCAAATTA TTATATTAAA
  TTATTATATT AAAAGTAGGA AGAATTTTGA GGTCTCCACT GCATTCTTCA CATCTTTGTC
  ATGTAAATGA GCTGGAGTAT AGTAAGTGGA ATTCCAATAG GCTTGAAATT TCAAATTAAG
  Y
  GATTCCGGAA TGCTGCAATT GGAAACGTCT TTTTGGCTTC TGGCTTCTGC TATACTTCCT
  GAAATAAGAG TGTGCTGCAC ATGTAAGATT CCTAGAGTGA AGATGAGGGC TGCTTCACAG
  CTCATTTAAA TTGCATCGCA CACAGCTTGT TTCTCTCTGA AAGACCAACC ATGTAATACA
  GGTTGCTCAG GCTGTGTTTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51669611	NES14637252	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37283989					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51669611	NES14637252	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:145569919 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ddah1	dimethylarginine dimethylaminohydrolase 1			Intron
				Noncoding-Transcript-Variant
Rr586854	regulatory region 586854			159 bp proximal
Rr586855	regulatory region 586855			574 bp proximal