rs37264796 SNP Detail

Summary

• ID
  rs37264796
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143654666 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCAGAGAG CTTTCTCTGT
  CTCGCACATT TAATCCTGCA CTGGGGTTAG AGAAAGGTGT CCATGAAAGC AGCATCAGTA
  GGCAAAGAAT TCTAGATATG GATTCATCTG CTTGAATTTA TTAGTGGGGT GACAGGCAAG
  GGGTGGTGTA ATTCTCTGGA TGTAGGCTTG AAGGACAGGA ATCAGGAGTC AGAAGTTTAC
  K
  TCCCAGGGCT GCTCCTGTGT CTCAGGATGA ACTTGGAATA ACCTCTCTGT GGCCCATATT
  TTTGCTATTT TAATAGGGGT GATCACCAGA GTTTCCAAAA TTTATGGGTC AGTCACAGGG
  GGGAAATTTC TACTAGTCCC CCCTTTCGCC ACCTCTTAAT CACTTCCCTG CCGCCGCCAT
  CACAATGTTC TTTGCAAAGG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51658679	NES14642469	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	G	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37264796					SNP	T	T	T	T	T	G	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51658679	NES14642469	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143654666 () rs orientation: forward

Symbol	Name	Function Class
Rr406686	regulatory region 406686	419 bp distal
Rr586568	regulatory region 586568	754 bp distal
Rr586569	regulatory region 586569	257 bp proximal