rs37258872 SNP Detail

Summary

• ID
  rs37258872
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143853625 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTATGTGT GTGTGTGTGT
  GTGTGTGTGT GTGTGTAAAT GGTTAAAACA TCAGTGGTGT GTAGAAAGAG AAGGCAAACA
  AAAAACAAAG GCTAAAAATC CAAGTTCACT ACAGGGTAGG GTATTTCCTA AGGAAGTCCT
  CTTCCCCATC ACCTAGACTC AGCGCCAGAA GATTAACCCA AATCATCCAC AGCTTGCCAA
  R
  TCGGTGTTCA AGGCTAGGTG AGGCAGTTGG TGGGTATGTC TCTTGACATC TGGTCATCAC
  TACAATGACT GACATCACTA CAATGACTGA CAGCAGGTGA CCTTTGAAGC AAGCCCTGGT
  CCCTGCAAGC TCTTCTGGAT GCTTGATCTC TTCTCATTCC AGATTTTTGC CTCTTTGGGG
  TTCCACAGTT GATACGATTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51656078	NES14644062	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37258872					SNP	A	A	A	A	A	A	A	A	A	A	G	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51656078	NES14644062	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143853625 () rs orientation: forward

Symbol	Name	Function Class
Rr586587	regulatory region 586587	429 bp distal