rs37249321 SNP Detail

Summary

• ID
  rs37249321
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:152059208 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTACCTGCC TTTTCTGCCC
  TTCCAGAGGA CGGAGGTTCA GGTCCCAGTG GTGCAGTGGA GTATAACTGC AGCTCTATGA
  GAACTGACAC CCATGGAGGC CTCCATCAGC ACCTGCACAC ACTGGTATAC ATTTACACAA
  TACACATTAA AAATAGAATA GGCCTAGTTA GAATGGAGGG AACGACAGCA TGTAAATGCC
  Y
  GAAGTTTGTC CAGCAGGGGC TTGAGGAGTG AAGAGCTAGG ACTGCGGAAT GAGAGAAGGT
  CTGTGCTCAG CTGTGCATCT GGAGATTAGT GCTAGAGCGT ATAAAGAGCC CAGCATTAAA
  CACTTTCCAG TCATCCAATA AACTACGGGC AAATGAACAG GCAGTTCTCA ACAGGAGAAC
  TACAGATGGC CAATAAATAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51676316	NES14645091	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37249321					SNP	T	T	T	T	T	T	C	T	T	T	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51676316	NES14645091	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152059208 () rs orientation: forward

Symbol	Name	Function Class
Rr587537	regulatory region 587537	564 bp distal
Rr587538	regulatory region 587538	1670 bp proximal
Usp33	ubiquitin specific peptidase 33	Intron