rs37247763 SNP Detail

Summary

• ID
  rs37247763
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:22192990 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGGAAGTG CAGCAGTGTA
  CTTACTCCCC ATGCCCCAGT AGGCTCCTGC TTCAGCCTGT ATTATCCAGG AAGAACAGGA
  GAACTGTTTG TGCACACTAC GCTTTGAATG AAACTGAGAT TACATTAATA GTAGTACTTA
  AATTGTTGTA ACTAAGTGAA TTGTTAAGCA TTATCATAAC CAAGAAACCC ACTGTTGACA
  K
  TTGGCTTCAA AATGTAAAAG ATCTTGAAAT TTAGATAACA GTGATATGGC ACTGCATGTT
  TTGGGAGGTG TGCCTCTTCA AAATAATGTG GCCTTAGGCT TTATCAGAGT TGCAGAAGTG
  AAACACTCTG AGATGTTTGG AAGGGAATTG ACAAAGCTTG GAGGTGACTA GGCAGGCAGA
  CAGGAAAAGT TGGGTGTCTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51433268	NES14434438	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G		G	G	G	G		T
ss320684107	CHEV_3_22037748	CHEVERUD	SCREENING_POP	f	SNP											G					T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37247763					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51433268	NES14434438	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:22192990 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr574211	regulatory region 574211			16 bp distal
Rr574212	regulatory region 574212			1026 bp proximal
Tbl1xr1	transducin (beta)-like 1X-linked receptor 1			Intron
				Noncoding-Transcript-Variant