rs37241650 SNP Detail

Summary

• ID
  rs37241650
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:96457904 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCGTGCAGGA ATTTGTTCAA
  CAAATGCTTT TTTGAATTAA AAAAAAAAAA TCTGAAATCC CTAAACTGTT AGGACATATG
  ATAATATGGT TCACACCTCA GAGGAGCTGT TTAGAGACAA GAGGCAGGCA CTGCAGAGGC
  AGGCACTACA GAGTTGGTAA AAACTATTCA TATGCATTGG AGGAGCTTAG CCTGCCACCA
  R
  GATTCCAAGG TTCCAGTTAA ATCTGTTTGG AGAAATCGCA GAGAACTGCG AAGGATGCGG
  TATTTGACCG TTTGAGGGCT CAGAGAGGCA CTAGAGAACA GGCACTTGAG CCATACGTCA
  GACGGTGTGG GGCAAGCTAT GGATGACCAG AGACAAGTGA CATCCTCCAA CCACCGTGTT
  CTTCTCTCAC TTCACACGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50995740	NES13927685	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37241650					SNP	G	G	G	G	G	G	G	G	G	A	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50995740	NES13927685	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:96457904 () rs orientation: forward

Symbol	Name	Function Class
Rr581316	regulatory region 581316	851 bp distal
Rr581317	regulatory region 581317	562 bp proximal