rs37233825 SNP Detail

Summary

• ID
  rs37233825
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89013568 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAAGGGAGAG TTCTAGGTAT
  AGACTCGACT TGTGCAGTCC TATTATTTAA CTGGTTTCAA CTGGATAGAA ACAGGGTCTT
  GAGGAAGGAG CCCCACTCTC ACCACATTAG GATGGGTAGG AACCTGGGAG AGGGAGGTGT
  GAAGAGCATT GGGTAGAAGA GAAAAGCCAG TAAAGGACTT CATGTTGAGG ATGCCCTAAA
  R
  ATTAGGCAGA GAGGCCTTAA GGACTTTCCC CTTCCCCAGC CACCAGGGAG AAGCTGCCCC
  GGTCTGGAAC ATGCCACCTA ACAGCCTTAG TTTTATCCCT GATGTCAGCT CTGCACGACC
  CATATCTGTA AGGGTGCCAG TAGGGCCCAG TGCAAAAGCC TAGTGCTCCC AAATGCATTT
  GGCTTGAGCC ATTCCATGCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51760855	NES14794809	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37233825					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51760855	NES14794809	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89013568 () rs orientation: forward

Symbol	Name	Function Class
Gm66902	predicted gene, 66902	within coordinates
Rr1306	regulatory region 1306	333 bp distal
Rr634070	regulatory region 634070	131 bp distal