rs37218684 SNP Detail

Summary

• ID
  rs37218684
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:5568737 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTTCTTTT CTTCAATACA
  AGGTCTCAGT ATGTGGCTTA ATCCCAGCAC TCAGGAGGCA GAGGCAGGTG GATCTCTGTG
  AGTTCAAGAC CAGCCTGGTT TACTTGGAGA GTTCTAGGCC AGTCAGGGCT TTATAGTGAA
  GCCTTGACTT TGAAGAAATA AAGAAGAGTG AAAAGGAACA GGGACCATAC AGGTAAACAC
  R
  GAGGACAGAT TTTCCAAGCA GAAAGGAGGG TGTGCTGGCG CCCATGCCGG GAAACTGAAT
  GGATTTCAGG AAAGGGCAAG GAGAGGATGT GGTAAAGCTA CAGCAGGAAA AATATTGTCC
  AATCAGTTGT GGACATGGGA GGAGCCTTGA TGAAAGGACT TAGACTTTGT TCTGTAGGCC
  ATAGGGACAA TGACACTGTT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50578774	NES13651829	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37218684					SNP	A	A	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50578774	NES13651829	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:5568737 () rs orientation: forward

Symbol	Name	Function Class
Gm59143	predicted gene, 59143	within coordinates
Rr543066	regulatory region 543066	1345 bp distal
Rr543067	regulatory region 543067	29 bp proximal
Rr543068	regulatory region 543068	1524 bp proximal