rs37213273 SNP Detail

Summary

• ID
  rs37213273
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:87471257 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAGGGGCCA CTCCTAGATA
  AACCACCACA GATGCTTAGA CACAATAGCA GGTGTTCACT CCCCTGAGTT GGTGGCAGTG
  TGGATAATCC CTACCCTCTT CCTTTCATTT CTTAAGGAAT CTTCATGTGT CTCCTTCTGT
  CAGATGCACT CTATGCTGTT AGGTGGTTCT GTCCATGTAG AAATGTCATT GAATGAACTT
  R
  CAGGAAAGCA GATGGCAGAG ATCAATCATG GTGAATGGCA GCAGGATGCT ATCAAGCAAA
  CACATGGTGC ACAAGGCTGC TAACCATGCT GTATACTGCT GGTACTTTGT TGCAAGTAGG
  GATATGAGCT AAAATTTTTA GAAGAGTGCC TACCAGAGAG CAACACCTTG GTTATAATCA
  TTTTCAAAAC GTAGGCATTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51577319	NES14673264	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37213273					SNP	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51577319	NES14673264	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87471257 () rs orientation: forward

Symbol	Name	Function Class
Rr579522	regulatory region 579522	1136 bp distal
Rr579523	regulatory region 579523	1370 bp distal
Rr579524	regulatory region 579524	1414 bp proximal