rs37212848 SNP Detail

Summary

• ID
  rs37212848
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:107030138 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTTTGCTG ATACATTAGT
  GGGACTTGTT TTGTTTTCTG TTTTTGTTTT GTTTTGTTTT TAAATCAACC ATATGCATCA
  AAACTTTGCA CCTCCACTTT CATAAAATAA ACCAAAGTCT GGAGGGGGCT ATCTGAGACA
  TTGAAGTAAA AATACGGTGG GAGAAACTGC TTTCCTTTCT TTCTTTGTTT TTGACTTTTT
  Y
  CTTGTTTGTA AAACAGGGTA TGGGTATCAT TCTGTGGTCC AGGATGGCCT GAAACTTCAC
  ACTTGTGCTA AGTATCCTGC TTCAGCATCC CATGTGCTAG GACTACTGAC AGAAGCAATC
  ATAGGGGAAT CAACATGGCA AAATTTCTAA CTGCTCTTGG TGGCACATCC TTGTAATTTT
  AAAAGGAGTC TGAAACTGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	CAST/EiJ	DBA/2J	NOD/ShiLtJ	WSB/EiJ
ss51400717	NES13726757	PERLEGEN	MM_PANEL2	f	SNP	T	C	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	CAST/EiJ	DBA/2J	NOD/ShiLtJ	WSB/EiJ
rs37212848					SNP	T	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51400717	NES13726757	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:107030138 () rs orientation: forward

Symbol	Name	Function Class
Rr379902	regulatory region 379902	144 bp downstream
Rr635986	regulatory region 635986	848 bp distal