rs37209267 SNP Detail

Summary

• ID
  rs37209267
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:68494302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGGGGAAG GCCTGCCTGT
  AGGAAAGATG TTTCATTAAG AACCCGGCTT ATTCAATAAC CACAGTAAAA CCAAACTAAA
  TAGAGAACAC ATCACAGTAC TTAGGGGGAA AAGCGGAGGT CTCGGCCATG AATGAGGGGT
  GTGTGCTTAG CCCACCACTC CCCTGCTCCG CAGTGGTCAC TGCTGAGTCT CTGCTGAGGA
  M
  CCACAGAGGC CTGAGAGACG ACAGCACACT CTGCTCTTGC ACGTGACTCA GGTTTGGCTT
  CTGGCACCCA CAGGGCAGTT CACGACTTCC TGTAAATCCC ATTCTTGGGG ATCCGACAGT
  CTCTCTCTCT CTCTGGTCTT CTCGGACCCC AGGCTCATAT GTGGCACGCA CACACACACA
  CACACACACA CACACACACA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51542819	NES14685755	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37209267					SNP	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51542819	NES14685755	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:68494302 () rs orientation: forward

Symbol	Name	Function Class
Iqschfp	Iqcj and Schip1 fusion protein	Intron
Rr578034	regulatory region 578034	1751 bp distal
Rr578035	regulatory region 578035	943 bp distal
Rr578036	regulatory region 578036	within coordinates
Rr578037	regulatory region 578037	380 bp proximal
Schip1	schwannomin interacting protein 1	Intron