rs37201326 SNP Detail

Summary

• ID
  rs37201326
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:65545805 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTCAACAA CCATATGGTC
  AGTTGGATAT GGGTACTCAC ATGACATGTT CATTTCCCTG CAAAAATCCA GCCACACACA
  AATGCAGGTC TTTTGTTGTG TAATGTTTTG ATTTTTTTCC CCCCAGAGGC ATTAGGATTC
  CAATTTCTCC AAATTTTTCT AATTTTTAAA ATATTGCTAG CTAATCTGAG GCTTACTAAG
  M
  ACCAATGAAG TATATTGGTG AGCACTGTCA TTTTACAGAT ATGGACTGCC CCAATCCGGA
  TCTGTCACCC AGGACTTTAA GGCTTCTGGA TTTAACTTTA CCTTTTCTCA GCGAGGAAGA
  AATAAAAACA CTGCAGTCAT AAAGAGTGCA TTAAGAAGCA CAAGGTATCG AAACAAGGGC
  AGAACAATGG TAGTCTACTA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss50965374	NES13945795	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs37201326					SNP	A	A	A	A	A	A	C	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50965374	NES13945795	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:65545805 () rs orientation: forward

Symbol	Name	Function Class
Gm65444	predicted gene, 65444	219 bp downstream
Rr577716	regulatory region 577716	683 bp distal
Rr577717	regulatory region 577717	534 bp proximal
Rr577718	regulatory region 577718	932 bp proximal
Tssr33467	transcription start site region 33467	894 bp downstream