rs37196216 SNP Detail

Summary

• ID
  rs37196216
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121996279 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACTTTACTTC TCAAACTGTG TTGAATGGCT GGGCAGTAAC
  TTTCCAAACA CAGCTGTAGG TAGCATGATC AGATCTGTTT CAGAAAAGTC ACTCTGGCAG
  R
  AAGTTCCCTG AGTCCCTGCT TGCTCAGCAA GAGGCCCTAA TCCTTTGATA ATCCTCCCAT
  AACCCTCTGT GGCTCCAGGG CAGCAAGGTT TAGGACTGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51021198	NES13906372	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	FVB/NJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37196216					SNP	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51021198	NES13906372	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121996279 () rs orientation: forward

Symbol	Name	Function Class
D3Jor1	DNA segment, Chr 3, Barbara Jordan 1	1216 bp proximal
Gm43158	predicted gene 43158	within coordinates
Gm46822	predicted gene, 46822	within coordinates
Rr584257	regulatory region 584257	within coordinates
Rr584258	regulatory region 584258	994 bp proximal