rs37193722 SNP Detail

Summary

• ID
  rs37193722
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:152775553 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGCCTAGGT CATCCTGAGA
  GCTGGCTTGC AAGCTTCCTG TCCCACTGTA GGAATCCTGG GACTGTAGAC TGTGCCTGGC
  TTTTCCTGGG TTCTGGGAAT CTGAACTCCG GTCCTCACAC TTGTGTGTAA GTTATTAGCC
  ATTGAGCCAT CTGTCCAGCC TGGATTCATT CACTGGTGGT GATAAAGTGT ATGTTAGCTC
  Y
  TCAGTTCCAT GACAGAGTAG ACACAGCTTG AACTGGACTC ACGTGGAAGT GACTACATAC
  TCATTTAACA AGCCCACGGG TGCAGGTGTC TCCTCATGAT CTGGGTCCTC CTGCCATTCG
  GTTCTCTTGG ACTTGAGCTT CCCCATCTGC TAGAAGAAAG CTCGGCTCTT GGTTGAAAAT
  TCAGCCCACA GAGAAACTGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51061772	NES13892869	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	C	T	C	T	T	T	T	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37193722					SNP	T	T	T	T	C	T	C	T	T	T	T	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51061772	NES13892869	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152775553 () rs orientation: forward

Symbol	Name	Function Class
Gm16213	predicted gene 16213	within coordinates
Gm40182	predicted gene, 40182	within coordinates
Gm66501	predicted gene, 66501	1394 bp upstream
Rr587647	regulatory region 587647	1218 bp proximal