rs37176631 SNP Detail

Summary

• ID
  rs37176631
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:85986728 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAGGCTAG CCTGGAACTT
  ACCAAGATTC TCTTGCTCCT GCCTCCTAAG AGCTGGGATT AAAGACTTTT AATTACTACT
  GTTACAAAGT TTAAACCTCA TCCTTGACGT TGTCTATAAC TATTCTTGAT TATGTTTACT
  CCTCAATGCC CTCTCCCATG CTCCTCCAAG TCTTCGCAAA ACCTCTATCC TAAACACTCT
  Y
  CTTCTGTCAA GTCTTATTTA AATGTACATT TATCTACTCT GTCTCTCTGA GTATGTATAT
  GCATGTGCGC ATGCATGTGC GCCTGTATGC CAGAGGCTCT GTGGAGTTCA AGATAACTTG
  CAGGAATCCA GTTCTCTTCT CCCACCCTGT GGGATCCCTG AATTAAACTC TGCTTGTCTG
  GCTTGTGTGG CAAGGGTCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51757795	NES14802191	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37176631					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51757795	NES14802191	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:85986728 () rs orientation: forward

Symbol	Name	Function Class
4930553P18Rik	RIKEN cDNA 4930553P18 gene	393 bp downstream
Gm33319	predicted gene, 33319	1837 bp upstream
Gm66378	predicted gene, 66378	within coordinates
Rr633312	regulatory region 633312	298 bp proximal
Rr633313	regulatory region 633313	394 bp proximal