rs37158029 SNP Detail

Summary

• ID
  rs37158029
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:16947993 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGTGCCCA GGTTATTCAA
  ATTTGACAGT TTATTTTAAA AGCAAGTTGG GTGAGTTTGC AAACACAAAA GCTAACAGAA
  AACTTTAGGA GCATGCATGT AAGTGAAACA GAAACCACAC AGAGGTTGGA CAGCAACAAA
  GGAATTTGTG GAGTAGTTGA AAATAATTTA AGGGCAGAGA GTAGACATAA ATAATCTCGA
  Y
  TCCTGAGTGT GGGACCATAA ACACTACAGA GACCTTGCCC CCAGCAGCGA GTAACATGAA
  GGCTTTATAG TGCCAGAACT GGTTGGAAGT CCTATGGATC AGACCAACTG CTGTTAACCT
  GATTACTTTT TTCTCATTAT GCCTAGGTCT AGACTAGAAT TCAGGATTTA GTTTCCCGTA
  AGCACTACCA TGTAATGACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51243277	NES13806296	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37158029					SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51243277	NES13806296	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:16947993 () rs orientation: forward

Symbol	Name	Function Class
Gm67421	predicted gene, 67421	within coordinates
Rr626731	regulatory region 626731	1126 bp proximal
Rr626732	regulatory region 626732	1172 bp proximal