rs37151620 SNP Detail

Summary

• ID
  rs37151620
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:152722335 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCTTCTGT GTTTCTGAAA
  AGCTTTAAAG GTGAACACGA GTGTCCATGG CTCAAACCTT TTCCTGTTTG GCCGATTTAA
  ATTCCTCCCT CACTCCACTT ACACACCCAT GTGACTGAAT ATACAAGCGA CAGCCTTGTT
  AGAGGGAGAG AGGGGAGGGT GAGGGGACGA GGGAGAGCGG GTGGCAGAGA GAGCAGAATG
  Y
  CCAAGGCTAG CCCCTATGCA TCCTCTTCAC CCACAGGAGA ACTTGGCTGC TCCTAACAAA
  ATCTTGAAAC TCACAGAACA ATCTTGAAAG TGACTTCCTA GCAGGAATAG AACTTCCTGT
  TGCATTAGGC CATGACGTTT GGCACCTGGT GTGGGTGACT GTATTCTTGG CGTGCTAGGA
  GCTATTGAGC CTTAGCAGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J
ss51062510	NES13894500	PERLEGEN	MM_PANEL2	f	SNP	T		T	T	T	T	T	T	C	C		T	C	C
ss136105626	ENSMUSSNP589867	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T						C
ss321029580	CHEV_3_152679662	CHEVERUD	SCREENING_POP	f	SNP											T				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J
rs37151620					SNP	T	T	T	T	T	T	T	T	C	C	T	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51062510	NES13894500	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152722335 () rs orientation: forward

Symbol	Name	Function Class
Gm16213	predicted gene 16213	within coordinates
Rr587644	regulatory region 587644	1361 bp proximal