rs37144787 SNP Detail

Summary

• ID
  rs37144787
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146957263 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGAAGAAA AGGACCTAGC
  TGCAGTAGTC TGGGATAAAC TGTTCTTCCA GGTAATCAGG GTGGCTTTTT TTGTCCAGAA
  CAGATGCTAC GAGATCATAT CTCCGAGAGA TGAACTGAGA ATGAATCTAC TTAAATTATA
  GTGCGCACAC AGAGGGTTTT AGCCTGTACA TTTGTGCTGG AGATTTATGA CAGTGTCCAT
  Y
  CGGCAGAGTC AATGAAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA
  GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAAACATAAT TACACTATAC AGTTTAGAGT
  ATGGGGGAAG TTTTTTAGGA AATTGGAAAC TTTTCATTGA AAGAGAAGGA AAGACAGGGA
  GTAGTGAGAA GGGAAAAGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51049430	NES13898670	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37144787					SNP	C	C	C	C	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51049430	NES13898670	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146957263 () rs orientation: forward

Symbol	Name	Function Class
Rr587140	regulatory region 587140	1299 bp distal
Rr587141	regulatory region 587141	711 bp proximal