rs37143822 SNP Detail

Summary

• ID
  rs37143822
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:94313888 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGCTCTAGA CTGAACTCTG
  ACCATTTAAC ATGAGTATGT TGACAATCTG GCCCCCAACA TGATTTGGGA AGGGGGCTTT
  TAAACAGTAA AGGATATATG AAAAAATAAA GAATCTAACT CAATAGGATT GGTGGTTTTG
  TAGAAGAAGA AAAACAAGGA GGAACCTTTG TCTCTTGTGT ACCACACACA CCAAGGAAAG
  R
  CCAGGTGAGC ACATGGAGAG AAGGTGGCCA TTTGCCCACC AGGACAGACC ATGCTGGTAC
  CCTGATTCTA CCCTCCAAAA CATTAGGAAC ACAGATGCCC ATTGTTTGAG CCATCTACTC
  CACGATGAGC CATCCACTCC ACGATGCTTT GTTATGGCAA CCCAATGTGA CTCAGACAGA
  TGACAGGCAC AGCCTCGTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51768295	NES14790671	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37143822					SNP	G	G	G	G	G	A	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51768295	NES14790671	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:94313888 () rs orientation: forward

Symbol	Name	Function Class
Rr634865	regulatory region 634865	269 bp distal