rs37136020 SNP Detail

Summary

• ID
  rs37136020
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130859906 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTTTTTA ATGTAAATAG
  ATGGTAGGAC GTGTTTTAAA GTTGGCTTTA AGTATCTCTG GGTAGAAGAG AAATAGAAGG
  CAGCTAAATA GGTAGGACAC CTTTACCGTG AACCCGCTTT ATAAACCACC ATTCATTTTG
  CCTTGATAAT CTGGTCCTCC ATTGTAACTG AATCCTAATT CCTTTTAACT TTCCTCATTC
  R
  GGTATGTTCT GCCTGCAGCC ACTTCAGCAC CCCACGCCTT TCAAGCATGT TTAATGGGAA
  AGGTGAGGGT TTTCTACAGC TAATTACTTA ATAGGTAACA AAGCATAGCT CTGCCAGGGA
  GGGCTCCAGA TCCTTCCAGC GGCTGCGAGG CCACTCCCCT CCCAGCCCGG CCCCCTCCCC
  CGCCCTCGTA TGAGTGTCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51635552	NES14652436	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37136020					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51635552	NES14652436	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130859906 () rs orientation: forward

Symbol	Name	Function Class
Gm65588	predicted gene, 65588	1767 bp upstream
Rr585259	regulatory region 585259	773 bp distal
Rr585260	regulatory region 585260	1094 bp distal
Rr585261	regulatory region 585261	1031 bp distal