rs37134260 SNP Detail

Summary

• ID
  rs37134260
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146957582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTATGGGGGA AGTTTTTTAG
  GAAATTGGAA ACTTTTCATT GAAAGAGAAG GAAAGACAGG GAGTAGTGAG AAGGGAAAAG
  TGCTCTCTCT CTCTCTCTCT GTGTGTGTGT GTGTGTGTGT GTGTGTTGGG TGTGATGGCA
  GAGAAAAGAC CTATGAGGGG AGAGAGAGAG AGAGAAAAGG AGAAGCATTT GAAATACATC
  R
  GGAGTATATG CCTGAGCCCT AGTGTGCTGG GCAGAGGATG GAGCTAGCTA AGTAAGTCTC
  CAGTGGGTCT CTAAGAAGAT GCTCCCCAAA CATGGCTCTC CACTGTACTC AAAGCCTCTC
  CTTTAAAGCC AGCCCCTGTC TAGAAGCCCT TTTCATTTTT AGCCTGGTCT TTCAGTTAGA
  GAAGAGAGCA AATTTATGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51049420	NES13898618	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37134260					SNP	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51049420	NES13898618	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146957582 () rs orientation: forward

Symbol	Name	Function Class
Rr587140	regulatory region 587140	1618 bp distal
Rr587141	regulatory region 587141	392 bp proximal