rs37133182 SNP Detail

Summary

• ID
  rs37133182
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:113356757 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCCTGCTTAA GTTAGTTCAT TTGTTCATTT ACTCTCCAGA
  AAATTGGTTT GACCTGATGT ATAGGAGGTG CTGGGCTAGA TACAACCTGA CAACTGAATA
  R
  AAGTTGATGT CTGTAGACCA CGAGAATTAC AAACTGGTGA AGGAAAAATT TATTCCTAAC
  GTTCTGTTGT GAATTTTATG TAAAGTGAAC ATACCATAAA                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51841925	NES14761527	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37133182					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51841925	NES14761527	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113356757 () rs orientation: forward

Symbol	Name	Function Class
Arpc4	actin related protein 2/3 complex, subunit 4	Intron
Cpgi17841	CpG island 17841	972 bp distal
Rr368143	regulatory region 368143	1691 bp downstream
Rr636499	regulatory region 636499	1216 bp distal
Rr636500	regulatory region 636500	890 bp distal
Rr636501	regulatory region 636501	208 bp distal
Rr636502	regulatory region 636502	1938 bp proximal
Tada3	transcriptional adaptor 3	1958 bp upstream
Tssr58199	transcription start site region 58199	1605 bp downstream
Tssr58200	transcription start site region 58200	917 bp upstream
Tssr62443	transcription start site region 62443	1941 bp upstream
Tssr62444	transcription start site region 62444	1919 bp upstream