rs37128200 SNP Detail

Summary

• ID
  rs37128200
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:117862956 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATATGAAGGG GTCCCTGAAG
  ACTTAGGACA CTTCTGATCA GCTCCTAATA TTCCTTTCCC TCCTTGCTGC CTCTGATATT
  TTTCATAATC ATTAAACTTT GAATTGGACA TGGCCTTGAT AAGTATTCAG TGCTATGAAA
  TAGAAAATAA AAAAGAAACC CTTGTTGTTG GTTCCAGTGA GGTTTTCAGA CTGAGGAAGC
  R
  TGACGAATAG CAATAGCAAT AGTCCTCCTG TCCTCTTCTT CACTCTGAAG CTAGCTGGCA
  GAGGAAGGAG CTAAATATCG CCGTTTTATG GAACTGTGAG GATTAAGGCA ATGTTTTTGA
  GACGAAAGTT AATCTACTTT GGTTTTTCTC CCATTTCCCA CCATCTCTCT GAGGTGGGAA
  TGAGTTACTG TATGGAAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
ss51597221	NES14669695	PERLEGEN	MM_PANEL2	f	SNP		G	G	G	G	G	A	G	G	G	A	G
ss135695976	ENSMUSSNP4103690	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G						G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	WSB/EiJ
rs37128200					SNP	A	G	G	G	G	G	A	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51597221	NES14669695	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117862956 () rs orientation: forward

Symbol	Name	Function Class
Gm65635	predicted gene, 65635	within coordinates
Rr583881	regulatory region 583881	851 bp proximal
Rr583882	regulatory region 583882	1125 bp proximal