rs37120576 SNP Detail

Summary

• ID
  rs37120576
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:8578985 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGTTGTTAC GATGTAATCT
  GTAACATTGT ATGAATGTCT GATCCACAGA AAACACTCAA ACCCAAATGC TTCCAGAACC
  GAAGCTATTT GCCTCCTAGT TCTTGCAATT GGGAGACCAT GGAGTCTGCA CTAACTTTTC
  ACACCACTAG AGGGCAATCA ATGTCTCTAT GATTGATTTT AACCAGGCTA CAAACGCTAA
  S
  TGCTAAAAAT AAATAAATAA AATAAAATAA AAAGTTTTCT TTTATTGGAA TCATTCGATT
  GTTGATTTAA TAGAATAATG CCATGCTTTG CTCTTGTGAA TGAGAAGGGC ATGCACATAT
  CTACAGTGGG ATGAGAGATT GCAATCTACA AGTTGGCAGA GCCCCGATAA TTAGTCCCTC
  ATGATCTTTT TTCCAGTTCC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51431702	NES14443122	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37120576					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51431702	NES14443122	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:8578985 () rs orientation: forward

Symbol	Name	Function Class
Rr374470	regulatory region 374470	1662 bp downstream
Rr573294	regulatory region 573294	within coordinates
Rr573295	regulatory region 573295	40 bp distal
Stmn2	stathmin-like 2	Intron