rs37098871 SNP Detail

Summary

• ID
  rs37098871
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr10:128128120 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCAGTAGAG CTGAGAGCTT GAAGAGAACT TAGCTATTTT
  ATTATTTTAT GAATAAGAGG GCATCATTTC TTTTGCACAG TGTTTTGTTA ACATGAAAGG
  R
  AAAAAAAAAA CCCAAAACTT CTGTTCCTTA GGAGTGACCT AGGCAAGGAC CAGGTTCCTT
  GGGTCTCAGA ACCTTGAAGG TTTATCAGAC ATCTTTATGC                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50948047	NES14141710	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	A	G	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37098871					SNP	G	G	A	A	G	A	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50948047	NES14141710	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128128120 () rs orientation: forward

Symbol	Name	Function Class
Stat2	signal transducer and activator of transcription 2	mRNA-UTR
Tssr96388	transcription start site region 96388	240 bp upstream