rs3709718 SNP Detail

Summary

• ID
  rs3709718
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:36852344 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAAGGACCA TCCTACTAGA AAGCAATTTA CAGACTCCAT
  GAAACCTCCA TGGAAATTTC CATGCCATTC TTTACAAAAA AAAAATTGGA AGAAACAACC
  R
  TAAAACTCAT ATAGAAGCAC AGGTGACTCT GGGAAGCCAA AGCAATCCTG AGCCAAAGGA
  ACAACGCTGG AGGCATTGCC CAGCTCAATC TTACACTGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
ss5085964	WI_WGS_3_36678097	WI	MOUSE	f	SNP	G		A
ss45453688	mCV24849755	ABI	CRAMUS_MOUSE	f	SNP		G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J
rs3709718					SNP	G	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:36852344 () rs orientation: forward

Symbol	Name	Function Class
Rr575399	regulatory region 575399	739 bp distal
Rr575400	regulatory region 575400	within coordinates