rs3709295 SNP Detail

Summary

• ID
  rs3709295
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148378438 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTCC TGCACGTCCT GTGTGAGCAG
  R
  GTGCAGAGCA CTCTACGCCA AAAAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5085541	WI_WGS_4_143659295	WI	MOUSE	f	SNP			A	G
ss148000493	ENSMUSSNP4548115	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A			A
ss321418928	CHEV_4_147668090	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3709295					SNP	A	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148378438 () rs orientation: forward

Symbol	Name	Function Class
Rr604647	regulatory region 604647	1513 bp distal
Rr604648	regulatory region 604648	243 bp distal