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rs37081785 SNP Detail
Summary
  • ID
    rs37081785
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr18:77590818 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                ACCTGTAAGC CAGCCCCAAT
    TAAATGTTGT CCTTTATAAG ACTTGCCAAG GTTATGGTGT CTGTTCACAG CAGTAAAACC
    CTAAGACAGC CACCAGAGTG TGGTTATCTG TCAAGACACT CGCCCAATAC AAAGCTAATT
    GTTGGTGGCC CCAAGCAGAC AGCAGCAGGC AGAGCCAAAG CGCTCTCCAG AAGGCTCTCC
    Y
    GCGCACTCTG GCTCACTACT CTGACTAACT CCTACCATCT CCAGATGCCT AGGGCTTGGA
    CACTCAGAGC TGTCATCAGA CTGTGCCAGG GTCCAGTAGG CTTACTCACT TCGGTCTGAC
    ACTCATCATT TCCCACACTG AGCTTTGTCC CAGGGAACCT GGTCTTAGGA AGGCCCTCCA
    GAGTGGAAAT GGGGTCCTGG                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss50501572 NES13695672 PERLEGEN MM_PANEL2 f SNP C C C C C C T C C T T C T T C
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs37081785 SNP C C C C C C T C C T T C T T C
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss50501572 NES13695672 PERLEGEN MM_PANEL f SNP C/T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr18:77590818 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Ark2c arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C Intron
Noncoding-Transcript-Variant
Cpgi10275 CpG island 10275 576 bp distal
Rr541132 regulatory region 541132 522 bp distal
Rr541133 regulatory region 541133 1817 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory