rs3708172 SNP Detail

Summary

• ID
  rs3708172
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38842153 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTGT GGTAAAGCTA ACCATGGGGG
  R
  AAACGGTTAA TTGCCTCTTC TGCTG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss5084416	WI_WGS_3_38667808	WI	MOUSE	f	SNP	A			G
ss134844017	ENSMUSSNP4959136	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss320723068	CHEV_3_38686926	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs3708172					SNP	A	A	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38842153 () rs orientation: forward

Symbol	Name	Function Class
Rr575703	regulatory region 575703	832 bp proximal