rs3707466 SNP Detail

Summary

• ID
  rs3707466
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:154909489 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATTA GCCTTAGTGG CTGTCACACC
  R
  TCCCAGCCTT GTCCCAGCAG CTGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5083708	WI_WGS_4_150274395	WI	MOUSE	f	SNP	G		A
ss148106717	ENSMUSSNP5602706	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss321440014	CHEV_4_154199141	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3707466					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:154909489 () rs orientation: forward

Symbol	Name	Function Class
Rr606270	regulatory region 606270	615 bp proximal
Rr606271	regulatory region 606271	918 bp proximal
Rr606272	regulatory region 606272	1015 bp proximal