rs37071182 SNP Detail

Summary

• ID
  rs37071182
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:86762019 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGGCCTTT CTCAATCACT
  TCCTCATCTC TATGAGCTTG CTGTTCAGAC TGGCTGGCCA GGGAGATCCC CAAACCCACC
  CAGCTCCTCT CCCTAGACAT TATGAGTACC TGTGGCCAGG CCTGGCTCTT ATGTGGGTGG
  TGTGATTCAA ACTGAGGTTG TTACACTCAC AGAGCAAGCG TTCTACCCAC TGAGCCATCC
  S
  TTTACAGTTC CTTAATTCGC TATAGGAAAC TCAAACTTGC AAGTGCAGCT CATGGCACAA
  CTCTAGATGT GGCTCTCTGT TCTGTTTTCC ATGACTGACA TGAGCAGGGT CGACTGAAAG
  GCCATTACAT TCAGACCTTG TTCTCCAGCC TGCGGAAGCA CGGTCAGTAG CCTTGTAATC
  CTCACCAAAG GATCTGTGTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51749623	NES14800011	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs37071182					SNP	G	G	G	C	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51749623	NES14800011	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:86762019 () rs orientation: forward

Symbol	Name	Function Class
Anxa4	annexin A4	Intron
Rr633512	regulatory region 633512	within coordinates
Tssr57506	transcription start site region 57506	25 bp upstream
Tssr57507	transcription start site region 57507	450 bp upstream
Tssr61859	transcription start site region 61859	1500 bp upstream
Tssr61860	transcription start site region 61860	482 bp downstream
Tssr61861	transcription start site region 61861	510 bp downstream