rs3706878 SNP Detail

Summary

• ID
  rs3706878
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:137253585 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGT CCAAATGAGA CTGTAAGTCA
  S
  GAACACAAGC TGCCCCACAC GCTCC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	LG/J	SM/J
ss5083118	WI_WGS_3_138046137	WI	MOUSE	f	SNP			G	C
ss45502108	mCV23944794	ABI	CRAMUS_MOUSE	f	SNP	C	G		C
ss135941310	ENSMUSSNP3147052	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
ss320975861	CHEV_3_137210788	CHEVERUD	SCREENING_POP	f	SNP					G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	LG/J	SM/J
rs3706878					SNP	C	G	G	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137253585 () rs orientation: forward

Symbol	Name	Function Class
D3Mit349	DNA Segment, Chr 3 Massachusetts Institute of Technology 349	1100 bp distal
Rr585946	regulatory region 585946	within coordinates