rs37067983 SNP Detail

Summary

• ID
  rs37067983
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143948624 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCGGGAAAGG GGATGACATT
  TGAAATGCAA ATAAAGAAAA TATTCCCCCC CCCCAAAAAA AAAAACAGAG TGCTATAACT
  ACCTACGATG CTTGTGTGTA CTGAGACATG GGAGAACTGC AAAGAGGGAT GGTTTTGCTT
  CATTTTCAAG CCCTTTCAAG GGTTTCAGGC AAGGCAATAT TGGCTGAGGG AAGGGGCTAG
  Y
  CTTTCCTGCT TTACTCACTG TGACTTGTGC CTCCTTGGAA ATGTCACAGC CAGATCCTTA
  AAAGGTGAAT GACACAGGAG CCAAACTGTA CAAATCACAC ACCCAGGCGA GGTATTGATG
  CCACCCAGAG CCCCCGGACC CTAAGGTCCT GGCTTGCTGG ATCGCAGAGA AGCGCAGAAC
  TCTAGGAAGC TTCTGCCTCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss51654932	NES14642977	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs37067983					SNP	C	C	C	C	C	C	C	C	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51654932	NES14642977	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143948624 () rs orientation: forward

Symbol	Name	Function Class
Rr398097	regulatory region 398097	457 bp downstream
Rr586608	regulatory region 586608	382 bp distal
Rr586609	regulatory region 586609	881 bp distal
Rr586610	regulatory region 586610	620 bp distal