rs37057306 SNP Detail

Summary

• ID
  rs37057306
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:83729256 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTTCACCT TGGGTGGCTC
  TTCTCCCTGA CAGTTTGCCC AGTATGCTGA GATTGTCAAC TTTACCCTCC CTGATGGTAC
  TCAGAGGAGT GGCCAGGTGC TTGAAGTGGC TGGGACCAAG GCCATTGTTC AGGTAAGTGT
  ACCAATTCTA AGAATGAACT CACAGTTCCA ATGCTATCTT ACAAGCCTTG GAGGGAAGAC
  R
  GACCTATGTC CCAGAGAACA CCCTGCTCAG AGCTGCACAC TGTGGGCCTT CAGTGGGAAG
  CCCCACTCTT TTCAGACAAG CCACTCAGCA ATGATGCCTA ACTCACAGGT GTTTGAAGGG
  ACTTCAGGGA TTGATTCCCA GAAGACCACA TGTGAATTCA CAGGGGACAT CCTGCGGACT
  CCTGTGTCAG AAGACATGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ
ss51352411	NES13741804	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NZW/LacJ
rs37057306					SNP	A	A	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51352411	NES13741804	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:83729256 () rs orientation: forward

Symbol	Name	Function Class
Atp6v1b1	ATPase, H+ transporting, lysosomal V1 subunit B1	Intron
Gm66892	predicted gene, 66892	within coordinates
Rr632931	regulatory region 632931	1525 bp distal
Rr632932	regulatory region 632932	1772 bp distal