rs3704796 SNP Detail

Summary

• ID
  rs3704796
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:38033038 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAAC ATTTCTTCCA AATGTGAAAG
  K
  AATTGTTTAT AGGGCCAAAA TTACT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss5081021	WI_WGS_3_37863914	WI	MOUSE	f	SNP	G			T
ss134819124	ENSMUSSNP755133	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		G
ss320714475	CHEV_3_37877811	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs3704796					SNP	G	G	G	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:38033038 () rs orientation: forward

Symbol	Name	Function Class
Gm20755	predicted gene, 20755	within coordinates
Rr575600	regulatory region 575600	1819 bp distal
Rr575601	regulatory region 575601	within coordinates
Rr575602	regulatory region 575602	1100 bp proximal
Rr575603	regulatory region 575603	1180 bp proximal