rs37047370 SNP Detail

Summary

• ID
  rs37047370
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:18432978 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTTCCATG GAATCTGCTT
  GGAATTAGAA GCATGCAGAC TGGCAATCTG AAGCACTTAG CTCCTTCACT GGTGGCCGGC
  TTCAGTCTGT GCTCCATGCT TTAAGTTTTA AAGGTGACCC TACTGATATT TCCCTTTCGT
  GTTTAAATTT CTGCTCTTTA GAGCCAGTAG GATCTGCCAA TCCCTAATGT CTGACGAGAG
  Y
  AGCACAGATT GCTCCAGAGT GCCAACAGAG CTCTGACCCT AATCATGAAT CAACTTTAGC
  CATGATAATG AAAAAGCAAT TCTTTCATAA CTATATACAG CCACGACAAC ATCTAGTCCT
  TTGTGGGACT CCCAGACTGA GCAACCTCAC AATGCACTCA TGCAATGGGA ACTTTAATGT
  CCCATGTGGT GTAGAAACCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	WSB/EiJ
ss51250493	NES13802212	PERLEGEN	MM_PANEL2	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	WSB/EiJ
rs37047370					SNP	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51250493	NES13802212	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:18432978 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cttnbp2	cortactin binding protein 2			Intron
				Noncoding-Transcript-Variant
Gm43843	predicted gene 43843			1734 bp upstream
Rr626922	regulatory region 626922			1568 bp proximal
Rr626923	regulatory region 626923			1763 bp proximal