rs37039629 SNP Detail

Summary

• ID
  rs37039629
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:149086875 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTATTTGT AATTTTGTGC
  ATATGGGTTG GGCTTGTGAG AACAGAGGAT CTCTCAAAGC TGGAGTCACA GGCAGGACTG
  TGCCTCTATG CGGGTGTTGG GAGCTGAAAT TTGCTTCTCT GTGGGAGCAG TAAGCACTCA
  CAGCTGCTAA ACCACCTCTC CACCACCAAG GCCTTGAAGC AAGGACAACA AGGGAAGCGC
  Y
  CTTCAGACAA GCCTGTCGCA CTTAGCCAGA CAATCAGCCT GGCCAGCCCC TCTCACCATC
  TCTTGCCAAG GTGGTGTCAT CCGTGCTGAA GTGAAAAGGT CTTCACTGCT AAACCTTTTC
  TGGAACAATC TTTCCCACCT TCTTCATTTG AGCCAGCAGG TCCCAGCTGT AAACGCTCTG
  CTGGTTTCTG ATGCTGATAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ
ss51052992	NES13894696	PERLEGEN	MM_PANEL2	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ
rs37039629					SNP	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51052992	NES13894696	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:149086875 () rs orientation: forward

Symbol	Name	Function Class
Gm30382	predicted gene, 30382	within coordinates
Gm64772	predicted gene, 64772	within coordinates
Rr587318	regulatory region 587318	773 bp distal
Rr587319	regulatory region 587319	282 bp proximal